Plant Transcription Factor Database
Previous version: v3.0
Carica papaya
ERF Family
Species TF ID Description
evm.model.supercontig_10.113ERF family protein
evm.model.supercontig_101.15ERF family protein
evm.model.supercontig_101.16ERF family protein
evm.model.supercontig_10.125ERF family protein
evm.model.supercontig_101.39ERF family protein
evm.model.supercontig_10.254ERF family protein
evm.model.supercontig_109.32ERF family protein
evm.model.supercontig_1.178ERF family protein
evm.model.supercontig_122.27ERF family protein
evm.model.supercontig_12.251ERF family protein
evm.model.supercontig_127.4ERF family protein
evm.model.supercontig_1288.2ERF family protein
evm.model.supercontig_13.175ERF family protein
evm.model.supercontig_131.83ERF family protein
evm.model.supercontig_132.31ERF family protein
evm.model.supercontig_13.250ERF family protein
evm.model.supercontig_13.253ERF family protein
evm.model.supercontig_13.83ERF family protein
evm.model.supercontig_14.126ERF family protein
evm.model.supercontig_151.27ERF family protein
evm.model.supercontig_151.29ERF family protein
evm.model.supercontig_151.30ERF family protein
evm.model.supercontig_16.148ERF family protein
evm.model.supercontig_162.25ERF family protein
evm.model.supercontig_18.194ERF family protein
evm.model.supercontig_19.121ERF family protein
evm.model.supercontig_194.13ERF family protein
evm.model.supercontig_20.67ERF family protein
evm.model.supercontig_21.106ERF family protein
evm.model.supercontig_21.63ERF family protein
evm.model.supercontig_21.69ERF family protein
evm.model.supercontig_21.70ERF family protein
evm.model.supercontig_2.277ERF family protein
evm.model.supercontig_2304.1ERF family protein
evm.model.supercontig_259.2ERF family protein
evm.model.supercontig_266.5ERF family protein
evm.model.supercontig_27.16ERF family protein
evm.model.supercontig_27.18ERF family protein
evm.model.supercontig_33.29ERF family protein
evm.model.supercontig_34.132ERF family protein
evm.model.supercontig_3.43ERF family protein
evm.model.supercontig_36.112ERF family protein
evm.model.supercontig_36.41ERF family protein
evm.model.supercontig_38.79ERF family protein
evm.model.supercontig_40.39ERF family protein
evm.model.supercontig_44.71ERF family protein
evm.model.supercontig_44.73ERF family protein
evm.model.supercontig_44.74ERF family protein
evm.model.supercontig_481.1ERF family protein
evm.model.supercontig_49.94ERF family protein
evm.model.supercontig_50.28ERF family protein
evm.model.supercontig_50.29ERF family protein
evm.model.supercontig_51.136ERF family protein
evm.model.supercontig_51.23ERF family protein
evm.model.supercontig_5.232ERF family protein
evm.model.supercontig_55.155ERF family protein
evm.model.supercontig_5.66ERF family protein
evm.model.supercontig_5.71ERF family protein
evm.model.supercontig_62.11ERF family protein
evm.model.supercontig_62.63ERF family protein
evm.model.supercontig_70.47ERF family protein
evm.model.supercontig_71.10ERF family protein
evm.model.supercontig_7.130ERF family protein
evm.model.supercontig_72.47ERF family protein
evm.model.supercontig_7.269ERF family protein
evm.model.supercontig_7.36ERF family protein
evm.model.supercontig_74.84ERF family protein
evm.model.supercontig_74.86ERF family protein
evm.model.supercontig_79.43ERF family protein
evm.model.supercontig_83.80ERF family protein
evm.model.supercontig_89.42ERF family protein
evm.model.supercontig_89.73ERF family protein
evm.model.supercontig_91.71ERF family protein
evm.model.supercontig_92.16ERF family protein
evm.model.supercontig_99.20ERF family protein
evm.model.supercontig_996.1ERF family protein
evm.TU.contig_30133.1ERF family protein
ERF Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444

The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102